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Query: sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range:1-300), from H.sapiens

Results of FFAS03 search in SCOP175
Master-slave alignment does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSRGAGALQRRTTTYLISLTLVKLESVPPPPPSPSAAAVGAPGARGSEPRDPGSPRGAEEPGKKRHERLFHRQDALWISTSSAGAGGAEPPALSPAPASPARPVSPAPGRRLSLWAAPPGPPLSGGLSPDSKPGGAPSSSRRPLLSSPSWGGPEPEGRTGGGVPGSSSPHPGTGSRRLKVAPPPPAPKPCKTVTTSGAKAGGGKGAGSRLSWPESEGKPRVKGSKSSAGTGASVSAAATAAAAGGGGSTASTSGGVGAGAGARGKLSPRKGKSKTLDNSDLHPGPPAGSPPPLTLPPTPSLast
1 -5.110d1gw5a_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  0  496LGEFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX................................................................................................................................................................................................................... 584
2 -2.510d1x48a1 d.50.1.1 (A:8-83) dsRNA-dependent protein kinase pkr {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  20  42YGTGSGVTKQEAKQLAAKEAYQKLLKSPPKTAGTS......................................................................................................................................................................................................................................................................... 76
3 -2.500d1t4oa_ d.50.1.1 (A:) RNase III, C-terminal domain {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}  ali model 3D-neighbors follow..  12  50LGTGVGRNIKIAGIRAAENALRDKK................................................................................................................................................................................................................................................................................... 74
4 -1.990d2jz6a1 d.325.1.1 (A:6-75) Ribosomal protein L28 (L28p) {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors follow..  21  1MAK-CGKAPRSGNTVSHSDKKSE..................................................................................................................................................................................................................................................................................... 26
5 -1.950d1o0wa2 d.50.1.1 (A:168-236) RNase III, C-terminal domain {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors follow..  10  45IATGKGRTKKEAEKEAARIA........................................................................................................................................................................................................................................................................................ 64
6 -1.850d1i2ha_ b.55.1.4 (A:) Homer {Rat (Rattus norvegicus) [TaxId: 10116]}  ali model 3D-neighbors follow..  12  114............................................................................................................................................................................................................................................................................LAKEKSQEKMELTSTPSQESAGGDLQSPLTPE 145
7 -1.740d1l1ca_ b.35.2.1 (A:) LicT {Bacillus subtilis [TaxId: 1423]}  ali model 3D-neighbors follow..  8  23VVMGRGLAFQKKSGDDVDEARIE..................................................................................................................................................................................................................................................................................... 45
8 -1.730d1vpza_ b.151.1.1 (A:) Carbon storage regulator homolog, CsrA {Pseudomonas aeruginosa [TaxId: 287]}  ali model 3D-neighbors follow..  18  6LTRRVGETLMVGDDVTVTVLGVKGNQVRIGVNAPKEVA...................................................................................................................................................................................................................................................................... 43
9 -1.620d1wvka_ g.82.1.1 (A:) Expressed protein At2g23090/F21P24.15 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}  ali model 3D-neighbors follow..  2  9EGGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKA......................................................................................................................................................................................................................................................................... 43
10 -1.530d1uhza_ d.50.1.1 (A:) staufen homolog 2 {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  15  50VATGTGPNKKIAKKNAAEAMLLQLGYKASTSLQDSGPSSG.................................................................................................................................................................................................................................................................... 89
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.