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Query: sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range:151-450), from H.sapiens

Results of FFAS03 search in SCOP175
Master-slave alignment does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst GGPEPEGRTGGGVPGSSSPHPGTGSRRLKVAPPPPAPKPCKTVTTSGAKAGGGKGAGSRLSWPESEGKPRVKGSKSSAGTGASVSAAATAAAAGGGGSTASTSGGVGAGAGARGKLSPRKGKSKTLDNSDLHPGPPAGSPPPLTLPPTPSPATAVTAASAQPPGPAPPITLEPPAPGLKRGREGGRASTRDRKMLKFISGIFTKSTGGPPGSGPLPGPPSLSSGSGSRELLGAELRASPKAVINSQEWTLSRSIPELRLGVLGDARSGKSSLIHRFLTGSYQVLEKTESEQYKKEMLVDGLast
1 -18.100d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  100  1...........................................................................................................................................................................................................................................................RSIPELRLGVLGDARSGKSSLIHRFLTGSYQVLEKTESEQYKKEMLVDG 49
2 -11.200d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  25  3.................................................................................................................................................................................................................................................................KVLLLGAPGVGKSALARIFGGVEDGPEAEAAGHTYDRSIVVDG 45
3 -10.300d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  27  6.................................................................................................................................................................................................................................................................KIAILGYRSVGKSSLTIQFVEGQFVDSYDPTENTFTKLITVNG 49
4 -10.300d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  30  4.................................................................................................................................................................................................................................................................RVAVFGAGGVGKSSLVLRFVKGTFRESYIPTEDTYRQVISCDK 47
5 -10.200d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  27  1............................................................................................................................................................................................................................................................NLPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTEDSYLKHTEIDN 49
6 -8.900d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  26  35..................................................................................................................................................................................................................................................................VAIVGLYRTGKSYLMNKLATGIWMWCVPHPKKPGHILVLLDG 94
7 -8.490d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  27  4.................................................................................................................................................................................................................................................................KMVVVGNGAVGKSSMIQRYCKGIFTKDKKTIGVDFLRQIQVND 48
8 -8.310d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  23  5.................................................................................................................................................................................................................................................................KLVLVGDGGTGKTTFVKRHLTGEFEKKVATLGVEVHLVFHTNR 49
9 -8.260d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  34  8.................................................................................................................................................................................................................................................................KVILLGDGGVGKSSLMNRYVTNKFDTQFHTIGVEFLKDLEVDG 52
10 -8.070d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}  ali model 3D-neighbors follow..  13  5....................................................................................................................................................................................................................................SGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGPRPVMVSRSRAGF---TLIIDG 89
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Igarashi Y, Eroshkin A, Gramatikova S, Gramatikoff K, Zhang Y, Smith JW,Osterman AL, Godzik A. CutDB: a proteolytic event database. Nucleic Acids Res. 2007 Jan;35(Database issue):D546-9. Epub 2006 Nov 16.